Build the lineage from a SILVA path string.

Build the lineage from a SILVA path string.

build_lineage(silva_path, taxid, taxonomy)

Arguments

silva_path

A string containing a taxonomy path with taxa separated by semicolons.

taxid

The overall taxid for the path/taxon.

taxonomy

The SILVA taxonomy as data table.

Value

A data table containing the individual taxa ranks with ids.